All of Malawi is a CDC malaria area. The lake and the parks each add a rule.
The CDC recommends malaria prevention medicine for the whole country, highlands included, in every season. At Lake Malawi, its advice is to avoid swimming in fresh water because of schistosomiasis, and in Liwonde, Nkhotakota and Kasungu, tsetse flies call for neutral long sleeves on game drives.
Are there mosquitoes in Malawi? Yes, and the CDC recommends malaria prevention medicine for the whole country, the lakeshore, the islands and the parks included, with no exception for the Zomba Plateau or Mount Mulanje. A June–September trip falls in the dry season, when mosquitoes tend to be fewer, and the two other things to plan for are lake water and tsetse flies.
Malaria: the whole country, highlands included
What CDC says: "CDC recommends that travelers going to Malawi take prescription medicine to prevent malaria." It lists the transmission areas as "All" and names atovaquone-proguanil, doxycycline, mefloquine and tafenoquine as the options. There is no exception for altitude or season, so Zomba and Mulanje are covered along with Lake Malawi and the parks. What we suggest you do with this: book a travel-medicine appointment 4–6 weeks before departure and bring every stop and your dates, from the lakeshore lodges to the parks and any hiking days. Our malaria-zone checklist covers everything around the prescription.
The parasite is mainly Plasmodium falciparum, resistant to chloroquine. Malaria mosquitoes bite from dusk to dawn, which on a lake trip means sunset on the beach and dinner on the deck. Repellent before sunset, long sleeves after dark and a net or screened room overnight cover those hours.
For yellow fever, the CDC says "Vaccine is not recommended," and Malawi doesn't require it on a direct trip from the US, but it does require proof from travelers 1 year or older arriving from a country with yellow fever risk, including layovers of more than 12 hours there. CDC's Level 2 Global Polio notice, updated September 23, 2026, lists Malawi, so ask the clinic about the one-time adult polio booster.
Lake Malawi and fresh water
For Cape Maclear, Likoma Island, Nkhata Bay and the rest of the lake, the CDC says, "Schistosomiasis, a parasitic infection that can be spread in fresh water, is found in Malawi. Avoid swimming in fresh, unchlorinated water, such as lakes, ponds, or rivers."
Tsetse flies in the parks
The CDC's Malawi page lists African sleeping sickness, spread by tsetse fly bites. Studies have documented tsetse in Liwonde National Park (2019) and inside Nkhotakota Wildlife Reserve and Kasungu National Park (2000 and 2009), and a 2024 study names the areas around Vwaza Marsh in Rumphi and Nkhotakota as the country's main foci of human cases. Tsetse bite by day, the bite is painful, and dark blue and black have a reputation for drawing them, so wear neutral-colored long sleeves and trousers on game drives and walks. If a painful bite is followed by fever, tell a doctor, and name the parks.
The CDC also lists leishmaniasis, from sand flies that bite from dusk to dawn, and African tick-bite fever, a reason for a tick check after bush walks.
The dry season, and what changes
June to September is Malawi's dry season, and it tends to be cool in June and July and hot by September. Mosquitoes tend to be fewer than in the rains but still bite at dusk on the lakeshore, and tsetse stay a daytime nuisance on game drives in any month. The rains, roughly November to April, tend to bring the most mosquitoes, so an April trip catches their tail and October heat leads into them.
Where you're going
Cape Maclear
Inside CDC's countrywide malaria advice, and on the lake where CDC's advice is to avoid swimming in fresh water. Sunset on the beach is the hour to reapply repellent.
Nkhata Bay
The same malaria and lake-water advice applies, and dusk mosquitoes tend to be the evening's biters. Nkhotakota Wildlife Reserve, a sleeping sickness focus, lies farther south on the same shore.
Liwonde National Park
Tsetse were trapped here in a 2019 study, and CDC lists sleeping sickness for Malawi, so wear neutral long sleeves on game drives and walks. Malaria medicine applies here as everywhere in Malawi.
Zomba & Mulanje
CDC gives no altitude exception for Malawi, so malaria medicine applies on the plateau and the mountain too. The highlands tend to be cooler, with fewer biting insects than the lake and the parks.
Continuing to Mozambique's coast, Victoria Falls or Tanzania? See our Mozambique, Victoria Falls and Tanzania briefings.
The Malawi kit
- Picaridin 20% travel sprays: odorless and quick to reapply before sunset on the beach. One 3.4 oz bottle lasts one person about a week.
- Permethrin 0.5% for safari clothes: treat neutral-colored long sleeves and trousers at home 48 hours before you fly. Clothing only, never skin.
- A travel bed net for lakeshore lodges without nets or screens.
What travelers report
Paraphrased from TripAdvisor reviews and a forum thread, newest first, and linked so you can read them in full. Conditions in camp change over the years and with the season.
- Kazuni Safari Camp, Vwaza Marsh Wildlife Reserve · 2017
A reviewer said the tsetse flies were the only real problem on their stay, and that wearing proper clothes limited it. TripAdvisor ↗
- Kazuni Safari Camp, Vwaza Marsh Wildlife Reserve · 2010
An earlier reviewer saw no tsetse at all around the camp and credited the tsetse traps there, but noted the flies are present deeper in the reserve where there are no traps. TripAdvisor ↗
- Cape Maclear
A poster shared a local health clinic's warning that the Cape Maclear area is heavily infested with schistosomiasis, that people can be infected even by showering in lake water, and that treatment is timed about three months after the last contact with the lake. TripAdvisor ↗
Any fever during or after your trip means a doctor visit, and you tell them you were in Malawi, which parks you visited and whether you were in the lake. After time in a malaria area, that rule holds for a year.
Traveler questions
Do I need malaria pills for Lake Malawi?
The CDC recommends malaria prevention medicine for all of Malawi, with no exception for any area or season, so Cape Maclear, Likoma Island, Nkhata Bay, the parks and the Zomba and Mulanje highlands are all covered, dry June–September months included. Which medicine fits you is a call for a travel clinic, made 4–6 weeks before departure with your full route. Our malaria-zone checklist covers the rest of the preparation.
Can I swim in Lake Malawi?
The CDC says: "Schistosomiasis, a parasitic infection that can be spread in fresh water, is found in Malawi. Avoid swimming in fresh, unchlorinated water, such as lakes, ponds, or rivers." That covers the lake at Cape Maclear, Likoma and Nkhata Bay. If you had any contact with lake water, tell your doctor after the trip.
Is sleeping sickness a risk on safari in Malawi?
The CDC's Malawi page lists African sleeping sickness, spread by tsetse flies, and studies have documented tsetse in Liwonde, Nkhotakota and Kasungu. A 2024 study names the areas around Vwaza Marsh in Rumphi and Nkhotakota as the main foci of human cases. Neutral-colored long sleeves and trousers, with no dark blue or black, keep bites down. Tell a doctor about any painful bite followed by fever, and which parks you visited.
Do I need a yellow fever vaccine for Malawi?
The CDC says "Vaccine is not recommended," and you don't need proof on a direct trip from the US. Malawi does require proof from travelers 1 year or older arriving from a country with yellow fever risk, including airport transits or layovers of more than 12 hours there, so bring your full routing to the clinic if Malawi follows another stop.
Sources
Health authorities, surveillance reports and news coverage of official bulletins used for this briefing, last checked October 2026. Traveler reports are linked where they appear. This page summarizes public-health guidance and is not medical advice.
- CDC destination page for travelers
- CDC Travel Health Notice
- European Centre for Disease Prevention and Control
- World Health Organization
- European Centre for Disease Prevention and Control
- CDC Travelers' Health
- CDC destination page for travelers
- Peer-reviewed study (PubMed Central)
- Peer-reviewed study (PubMed Central)
- Peer-reviewed study (PubMed Central)
- Peer-reviewed study (PubMed Central)
- Peer-reviewed study (PubMed Central)
- Peer-reviewed study (PubMed Central)
- CDC Travel Health Notice
- expertafrica.com